INCISIVE Implementation Guide
0.1.1 - draft

INCISIVE Implementation Guide - Local Development build (v0.1.1) built by the FHIR (HL7® FHIR® Standard) Build Tools. See the Directory of published versions

Logical Model: ColorectalTumorProfileResultLogicalModel - XML Profile

Draft as of 2024-03-19

XML representation of the ColorectalTumorProfileResultLogicalModel logical model.

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<StructureDefinition xmlns="http://hl7.org/fhir">
  <id value="ColorectalTumorProfileResultLogicalModel"/>
  <text>
    <status value="extensions"/>
    <div xmlns="http://www.w3.org/1999/xhtml"><table border="0" cellpadding="0" cellspacing="0" style="border: 0px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top;"><tr style="border: 1px #F0F0F0 solid; font-size: 11px; font-family: verdana; vertical-align: top"><th style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="https://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views" title="The logical name of the element">Name</a></th><th style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="https://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views" title="Information about the use of the element">Flags</a></th><th style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="https://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views" title="Minimum and Maximum # of times the the element can appear in the instance">Card.</a></th><th style="width: 100px" class="hierarchy"><a href="https://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views" title="Reference to the type of the element">Type</a></th><th style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="https://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views" title="Additional information about the element">Description &amp; Constraints</a><span style="float: right"><a href="https://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views" title="Legend for this format"><img src="data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAABAAAAAQCAYAAAAf8/9hAAAABmJLR0QA/wD/AP+gvaeTAAAACXBIWXMAAAsTAAALEwEAmpwYAAAAB3RJTUUH3goXBCwdPqAP0wAAAldJREFUOMuNk0tIlFEYhp9z/vE2jHkhxXA0zJCMitrUQlq4lnSltEqCFhFG2MJFhIvIFpkEWaTQqjaWZRkp0g26URZkTpbaaOJkDqk10szoODP//7XIMUe0elcfnPd9zsfLOYplGrpRwZaqTtw3K7PtGem7Q6FoidbGgqHVy/HRb669R+56zx7eRV1L31JGxYbBtjKK93cxeqfyQHbehkZbUkK20goELEuIzEd+dHS+qz/Y8PTSif0FnGkbiwcAjHaU1+QWOptFiyCLp/LnKptpqIuXHx6rbR26kJcBX3yLgBfnd7CxwJmflpP2wUg0HIAoUUpZBmKzELGWcN8nAr6Gpu7tLU/CkwAaoKTWRSQyt89Q8w6J+oVQkKnBoblH7V0PPvUOvDYXfopE/SJmALsxnVm6LbkotrUtNowMeIrVrBcBpaMmdS0j9df7abpSuy7HWehwJdt1lhVwi/J58U5beXGAF6c3UXLycw1wdFklArBn87xdh0ZsZtArghBdAA3+OEDVubG4UEzP6x1FOWneHh2VDAHBAt80IbdXDcesNoCvs3E5AFyNSU5nbrDPZpcUEQQTFZiEVx+51fxMhhyJEAgvlriadIJZZksRuwBYMOPBbO3hePVVqgEJhFeUuFLhIPkRP6BQLIBrmMenujm/3g4zc398awIe90Zb5A1vREALqneMcYgP/xVQWlG+Ncu5vgwwlaUNx+3799rfe96u9K0JSDXcOzOTJg4B6IgmXfsygc7/Bvg9g9E58/cDVmGIBOP/zT8Bz1zqWqpbXIsd0O9hajXfL6u4BaOS6SeWAAAAAElFTkSuQmCC" alt="doco" style="background-color: inherit"/></a></span></th></tr><tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white"><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck1.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_element.gif" alt="." style="background-color: white; background-color: inherit" title="Element" class="hierarchy"/> <a href="StructureDefinition-ColorectalTumorProfileResultLogicalModel-definitions.html#ColorectalTumorProfileResultLogicalModel" title="INCISIVE based logical model for the tumor profile result of Colorectal cancer">ColorectalTumorProfileResultLogicalModel</a><a name="ColorectalTumorProfileResultLogicalModel"> </a></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"/><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><span style="opacity: 0.5">0</span><span style="opacity: 0.5">..</span><span style="opacity: 0.5">*</span></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://build.fhir.org/types.html#Base">Base</a></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">Tumor profile result Colorectal<br/><span style="font-weight:bold">Instances of this logical model are not marked to be the target of a Reference</span></td></tr>
<tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7"><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_datatype.gif" alt="." style="background-color: #F7F7F7; background-color: inherit" title="Data Type" class="hierarchy"/> <a href="StructureDefinition-ColorectalTumorProfileResultLogicalModel-definitions.html#ColorectalTumorProfileResultLogicalModel.tumorProfileResultID" title="An identifier for the tumor profile result">tumorProfileResultID</a><a name="ColorectalTumorProfileResultLogicalModel.tumorProfileResultID"> </a></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"/><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">1..1</td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/datatypes.html#Identifier">Identifier</a></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">An identifier for the tumor profile result</td></tr>
<tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white"><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_resource.png" alt="." style="background-color: white; background-color: inherit" title="Resource" class="hierarchy"/> <a href="StructureDefinition-ColorectalTumorProfileResultLogicalModel-definitions.html#ColorectalTumorProfileResultLogicalModel.patientID" title="INCISIVE patient">patientID</a><a name="ColorectalTumorProfileResultLogicalModel.patientID"> </a></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"/><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">1..1</td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="StructureDefinition-INCISIVEPatientLogicalModel.html">INCISIVEPatientLogicalModel</a></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">INCISIVE patient</td></tr>
<tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7"><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_primitive.png" alt="." style="background-color: #F7F7F7; background-color: inherit" title="Primitive Data Type" class="hierarchy"/> <a href="StructureDefinition-ColorectalTumorProfileResultLogicalModel-definitions.html#ColorectalTumorProfileResultLogicalModel.mmr" title="DNA mismatch repair protein Msh3 [Presence] in Cancer specimen by Immune stain">mmr</a><a name="ColorectalTumorProfileResultLogicalModel.mmr"> </a></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"/><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">0..1</td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/datatypes.html#boolean">boolean</a></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">DNA mismatch repair protein Msh3 [Presence] in Cancer specimen by Immune stain</td></tr>
<tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white"><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_primitive.png" alt="." style="background-color: white; background-color: inherit" title="Primitive Data Type" class="hierarchy"/> <a href="StructureDefinition-ColorectalTumorProfileResultLogicalModel-definitions.html#ColorectalTumorProfileResultLogicalModel.msi" title="Microsatellite markers exhibiting instability/Microsatellite instability markers assessed in Cancer specimen">msi</a><a name="ColorectalTumorProfileResultLogicalModel.msi"> </a></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"/><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">0..1</td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/datatypes.html#boolean">boolean</a></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">Microsatellite markers exhibiting instability/Microsatellite instability markers assessed in Cancer specimen</td></tr>
<tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7"><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_primitive.png" alt="." style="background-color: #F7F7F7; background-color: inherit" title="Primitive Data Type" class="hierarchy"/> <a href="StructureDefinition-ColorectalTumorProfileResultLogicalModel-definitions.html#ColorectalTumorProfileResultLogicalModel.pik3ca" title="PIK3CA gene [VCF] in Cancer specimen by Sequencing">pik3ca</a><a name="ColorectalTumorProfileResultLogicalModel.pik3ca"> </a></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"/><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">0..1</td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/datatypes.html#boolean">boolean</a></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">PIK3CA gene [VCF] in Cancer specimen by Sequencing</td></tr>
<tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white"><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_primitive.png" alt="." style="background-color: white; background-color: inherit" title="Primitive Data Type" class="hierarchy"/> <a href="StructureDefinition-ColorectalTumorProfileResultLogicalModel-definitions.html#ColorectalTumorProfileResultLogicalModel.tgfbr" title="TGFBR1 gene+TGFBR2 gene targeted mutation analysis in Blood or Tissue by Molecular genetics method">tgfbr</a><a name="ColorectalTumorProfileResultLogicalModel.tgfbr"> </a></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"/><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">0..1</td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/datatypes.html#boolean">boolean</a></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">TGFBR1 gene+TGFBR2 gene targeted mutation analysis in Blood or Tissue by Molecular genetics method</td></tr>
<tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7"><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_primitive.png" alt="." style="background-color: #F7F7F7; background-color: inherit" title="Primitive Data Type" class="hierarchy"/> <a href="StructureDefinition-ColorectalTumorProfileResultLogicalModel-definitions.html#ColorectalTumorProfileResultLogicalModel.Loh18q" title="18q chromosome deletion [Identifier] in Blood or Tissue by Molecular genetics method Nominal">Loh18q</a><a name="ColorectalTumorProfileResultLogicalModel.Loh18q"> </a></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"/><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">0..1</td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/datatypes.html#boolean">boolean</a></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">18q chromosome deletion [Identifier] in Blood or Tissue by Molecular genetics method Nominal</td></tr>
<tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white"><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_primitive.png" alt="." style="background-color: white; background-color: inherit" title="Primitive Data Type" class="hierarchy"/> <a href="StructureDefinition-ColorectalTumorProfileResultLogicalModel-definitions.html#ColorectalTumorProfileResultLogicalModel.tp53" title="TP53 gene mutations found [Identifier] in Blood or Tissue by Molecular genetics method Nominal">tp53</a><a name="ColorectalTumorProfileResultLogicalModel.tp53"> </a></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"/><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">0..1</td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/datatypes.html#boolean">boolean</a></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">TP53 gene mutations found [Identifier] in Blood or Tissue by Molecular genetics method Nominal</td></tr>
<tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: #F7F7F7"><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck10.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_primitive.png" alt="." style="background-color: #F7F7F7; background-color: inherit" title="Primitive Data Type" class="hierarchy"/> <a href="StructureDefinition-ColorectalTumorProfileResultLogicalModel-definitions.html#ColorectalTumorProfileResultLogicalModel.apc" title="GSTP1 gene+APC gene methylation [Presence] in Tissue by Molecular genetics method">apc</a><a name="ColorectalTumorProfileResultLogicalModel.apc"> </a></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"/><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">0..1</td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/datatypes.html#boolean">boolean</a></td><td style="vertical-align: top; text-align : left; background-color: #F7F7F7; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">GSTP1 gene+APC gene methylation [Presence] in Tissue by Molecular genetics method</td></tr>
<tr style="border: 0px #F0F0F0 solid; padding:0px; vertical-align: top; background-color: white"><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px; white-space: nowrap; background-image: url(tbl_bck00.png)" class="hierarchy"><img src="tbl_spacer.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="tbl_vjoin_end.png" alt="." style="background-color: inherit" class="hierarchy"/><img src="icon_primitive.png" alt="." style="background-color: white; background-color: inherit" title="Primitive Data Type" class="hierarchy"/> <a href="StructureDefinition-ColorectalTumorProfileResultLogicalModel-definitions.html#ColorectalTumorProfileResultLogicalModel.kRas" title="KRAS gene mutations tested for in Blood or Tissue by Molecular genetics method Nominal">kRas</a><a name="ColorectalTumorProfileResultLogicalModel.kRas"> </a></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"/><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">0..1</td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy"><a href="http://hl7.org/fhir/R4/datatypes.html#boolean">boolean</a></td><td style="vertical-align: top; text-align : left; background-color: white; border: 0px #F0F0F0 solid; padding:0px 4px 0px 4px" class="hierarchy">KRAS gene mutations tested for in Blood or Tissue by Molecular genetics method Nominal</td></tr>
<tr><td colspan="5" class="hierarchy"><br/><a href="https://build.fhir.org/ig/FHIR/ig-guidance/readingIgs.html#table-views" title="Legend for this format"><img src="data:image/png;base64,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" alt="doco" style="background-color: inherit"/> Documentation for this format</a></td></tr></table></div>
  </text>
  <url
       value="https://fhir.incisive-project.eu/StructureDefinition/ColorectalTumorProfileResultLogicalModel"/>
  <version value="0.1.1"/>
  <name value="ColorectalTumorProfileResultLogicalModel"/>
  <title value="Tumor profile result Colorectal"/>
  <status value="draft"/>
  <date value="2024-03-19T13:26:22+01:00"/>
  <publisher value="INCISIVE"/>
  <contact>
    <name value="INCISIVE"/>
    <telecom>
      <system value="url"/>
      <value value="https://incisive-project.eu/"/>
    </telecom>
    <telecom>
      <system value="email"/>
      <value value="fhir@incisive-project.eu"/>
    </telecom>
  </contact>
  <description
               value="INCISIVE based logical model for the tumor profile result of Colorectal cancer"/>
  <fhirVersion value="4.0.1"/>
  <kind value="logical"/>
  <abstract value="false"/>
  <type
        value="https://fhir.incisive-project.eu/StructureDefinition/ColorectalTumorProfileResultLogicalModel"/>
  <baseDefinition value="http://hl7.org/fhir/StructureDefinition/Base"/>
  <derivation value="specialization"/>
  <snapshot>
    <element id="ColorectalTumorProfileResultLogicalModel">
      <path value="ColorectalTumorProfileResultLogicalModel"/>
      <short value="Tumor profile result Colorectal"/>
      <definition
                  value="INCISIVE based logical model for the tumor profile result of Colorectal cancer"/>
      <min value="0"/>
      <max value="*"/>
      <base>
        <path value="Base"/>
        <min value="0"/>
        <max value="*"/>
      </base>
      <isModifier value="false"/>
    </element>
    <element
             id="ColorectalTumorProfileResultLogicalModel.tumorProfileResultID">
      <path
            value="ColorectalTumorProfileResultLogicalModel.tumorProfileResultID"/>
      <short value="An identifier for the tumor profile result"/>
      <definition value="An identifier for the tumor profile result"/>
      <min value="1"/>
      <max value="1"/>
      <base>
        <path
              value="ColorectalTumorProfileResultLogicalModel.tumorProfileResultID"/>
        <min value="1"/>
        <max value="1"/>
      </base>
      <type>
        <code value="Identifier"/>
      </type>
    </element>
    <element id="ColorectalTumorProfileResultLogicalModel.patientID">
      <path value="ColorectalTumorProfileResultLogicalModel.patientID"/>
      <short value="INCISIVE patient"/>
      <definition value="INCISIVE patient"/>
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      <base>
        <path value="ColorectalTumorProfileResultLogicalModel.patientID"/>
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      <type>
        <code
              value="https://fhir.incisive-project.eu/StructureDefinition/INCISIVEPatientLogicalModel"/>
      </type>
    </element>
    <element id="ColorectalTumorProfileResultLogicalModel.mmr">
      <path value="ColorectalTumorProfileResultLogicalModel.mmr"/>
      <short
             value="DNA mismatch repair protein Msh3 [Presence] in Cancer specimen by Immune stain"/>
      <definition
                  value="DNA mismatch repair protein Msh3 [Presence] in Cancer specimen by Immune stain"/>
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      <type>
        <code value="boolean"/>
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    </element>
    <element id="ColorectalTumorProfileResultLogicalModel.msi">
      <path value="ColorectalTumorProfileResultLogicalModel.msi"/>
      <short
             value="Microsatellite markers exhibiting instability/Microsatellite instability markers assessed in Cancer specimen"/>
      <definition
                  value="Microsatellite markers exhibiting instability/Microsatellite instability markers assessed in Cancer specimen"/>
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      </type>
    </element>
    <element id="ColorectalTumorProfileResultLogicalModel.pik3ca">
      <path value="ColorectalTumorProfileResultLogicalModel.pik3ca"/>
      <short value="PIK3CA gene [VCF] in Cancer specimen by Sequencing"/>
      <definition value="PIK3CA gene [VCF] in Cancer specimen by Sequencing"/>
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      <type>
        <code value="boolean"/>
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    </element>
    <element id="ColorectalTumorProfileResultLogicalModel.tgfbr">
      <path value="ColorectalTumorProfileResultLogicalModel.tgfbr"/>
      <short
             value="TGFBR1 gene+TGFBR2 gene targeted mutation analysis in Blood or Tissue by Molecular genetics method"/>
      <definition
                  value="TGFBR1 gene+TGFBR2 gene targeted mutation analysis in Blood or Tissue by Molecular genetics method"/>
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      <max value="1"/>
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        <path value="ColorectalTumorProfileResultLogicalModel.tgfbr"/>
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      </base>
      <type>
        <code value="boolean"/>
      </type>
    </element>
    <element id="ColorectalTumorProfileResultLogicalModel.Loh18q">
      <path value="ColorectalTumorProfileResultLogicalModel.Loh18q"/>
      <short
             value="18q chromosome deletion [Identifier] in Blood or Tissue by Molecular genetics method Nominal"/>
      <definition
                  value="18q chromosome deletion [Identifier] in Blood or Tissue by Molecular genetics method Nominal"/>
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      <type>
        <code value="boolean"/>
      </type>
    </element>
    <element id="ColorectalTumorProfileResultLogicalModel.tp53">
      <path value="ColorectalTumorProfileResultLogicalModel.tp53"/>
      <short
             value="TP53 gene mutations found [Identifier] in Blood or Tissue by Molecular genetics method Nominal"/>
      <definition
                  value="TP53 gene mutations found [Identifier] in Blood or Tissue by Molecular genetics method Nominal"/>
      <min value="0"/>
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      <type>
        <code value="boolean"/>
      </type>
    </element>
    <element id="ColorectalTumorProfileResultLogicalModel.apc">
      <path value="ColorectalTumorProfileResultLogicalModel.apc"/>
      <short
             value="GSTP1 gene+APC gene methylation [Presence] in Tissue by Molecular genetics method"/>
      <definition
                  value="GSTP1 gene+APC gene methylation [Presence] in Tissue by Molecular genetics method"/>
      <min value="0"/>
      <max value="1"/>
      <base>
        <path value="ColorectalTumorProfileResultLogicalModel.apc"/>
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      </base>
      <type>
        <code value="boolean"/>
      </type>
    </element>
    <element id="ColorectalTumorProfileResultLogicalModel.kRas">
      <path value="ColorectalTumorProfileResultLogicalModel.kRas"/>
      <short
             value="KRAS gene mutations tested for in Blood or Tissue by Molecular genetics method Nominal"/>
      <definition
                  value="KRAS gene mutations tested for in Blood or Tissue by Molecular genetics method Nominal"/>
      <min value="0"/>
      <max value="1"/>
      <base>
        <path value="ColorectalTumorProfileResultLogicalModel.kRas"/>
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      <type>
        <code value="boolean"/>
      </type>
    </element>
  </snapshot>
  <differential>
    <element id="ColorectalTumorProfileResultLogicalModel">
      <path value="ColorectalTumorProfileResultLogicalModel"/>
      <short value="Tumor profile result Colorectal"/>
      <definition
                  value="INCISIVE based logical model for the tumor profile result of Colorectal cancer"/>
    </element>
    <element
             id="ColorectalTumorProfileResultLogicalModel.tumorProfileResultID">
      <path
            value="ColorectalTumorProfileResultLogicalModel.tumorProfileResultID"/>
      <short value="An identifier for the tumor profile result"/>
      <definition value="An identifier for the tumor profile result"/>
      <min value="1"/>
      <max value="1"/>
      <type>
        <code value="Identifier"/>
      </type>
    </element>
    <element id="ColorectalTumorProfileResultLogicalModel.patientID">
      <path value="ColorectalTumorProfileResultLogicalModel.patientID"/>
      <short value="INCISIVE patient"/>
      <definition value="INCISIVE patient"/>
      <min value="1"/>
      <max value="1"/>
      <type>
        <code
              value="https://fhir.incisive-project.eu/StructureDefinition/INCISIVEPatientLogicalModel"/>
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    <element id="ColorectalTumorProfileResultLogicalModel.mmr">
      <path value="ColorectalTumorProfileResultLogicalModel.mmr"/>
      <short
             value="DNA mismatch repair protein Msh3 [Presence] in Cancer specimen by Immune stain"/>
      <definition
                  value="DNA mismatch repair protein Msh3 [Presence] in Cancer specimen by Immune stain"/>
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      <max value="1"/>
      <type>
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    </element>
    <element id="ColorectalTumorProfileResultLogicalModel.msi">
      <path value="ColorectalTumorProfileResultLogicalModel.msi"/>
      <short
             value="Microsatellite markers exhibiting instability/Microsatellite instability markers assessed in Cancer specimen"/>
      <definition
                  value="Microsatellite markers exhibiting instability/Microsatellite instability markers assessed in Cancer specimen"/>
      <min value="0"/>
      <max value="1"/>
      <type>
        <code value="boolean"/>
      </type>
    </element>
    <element id="ColorectalTumorProfileResultLogicalModel.pik3ca">
      <path value="ColorectalTumorProfileResultLogicalModel.pik3ca"/>
      <short value="PIK3CA gene [VCF] in Cancer specimen by Sequencing"/>
      <definition value="PIK3CA gene [VCF] in Cancer specimen by Sequencing"/>
      <min value="0"/>
      <max value="1"/>
      <type>
        <code value="boolean"/>
      </type>
    </element>
    <element id="ColorectalTumorProfileResultLogicalModel.tgfbr">
      <path value="ColorectalTumorProfileResultLogicalModel.tgfbr"/>
      <short
             value="TGFBR1 gene+TGFBR2 gene targeted mutation analysis in Blood or Tissue by Molecular genetics method"/>
      <definition
                  value="TGFBR1 gene+TGFBR2 gene targeted mutation analysis in Blood or Tissue by Molecular genetics method"/>
      <min value="0"/>
      <max value="1"/>
      <type>
        <code value="boolean"/>
      </type>
    </element>
    <element id="ColorectalTumorProfileResultLogicalModel.Loh18q">
      <path value="ColorectalTumorProfileResultLogicalModel.Loh18q"/>
      <short
             value="18q chromosome deletion [Identifier] in Blood or Tissue by Molecular genetics method Nominal"/>
      <definition
                  value="18q chromosome deletion [Identifier] in Blood or Tissue by Molecular genetics method Nominal"/>
      <min value="0"/>
      <max value="1"/>
      <type>
        <code value="boolean"/>
      </type>
    </element>
    <element id="ColorectalTumorProfileResultLogicalModel.tp53">
      <path value="ColorectalTumorProfileResultLogicalModel.tp53"/>
      <short
             value="TP53 gene mutations found [Identifier] in Blood or Tissue by Molecular genetics method Nominal"/>
      <definition
                  value="TP53 gene mutations found [Identifier] in Blood or Tissue by Molecular genetics method Nominal"/>
      <min value="0"/>
      <max value="1"/>
      <type>
        <code value="boolean"/>
      </type>
    </element>
    <element id="ColorectalTumorProfileResultLogicalModel.apc">
      <path value="ColorectalTumorProfileResultLogicalModel.apc"/>
      <short
             value="GSTP1 gene+APC gene methylation [Presence] in Tissue by Molecular genetics method"/>
      <definition
                  value="GSTP1 gene+APC gene methylation [Presence] in Tissue by Molecular genetics method"/>
      <min value="0"/>
      <max value="1"/>
      <type>
        <code value="boolean"/>
      </type>
    </element>
    <element id="ColorectalTumorProfileResultLogicalModel.kRas">
      <path value="ColorectalTumorProfileResultLogicalModel.kRas"/>
      <short
             value="KRAS gene mutations tested for in Blood or Tissue by Molecular genetics method Nominal"/>
      <definition
                  value="KRAS gene mutations tested for in Blood or Tissue by Molecular genetics method Nominal"/>
      <min value="0"/>
      <max value="1"/>
      <type>
        <code value="boolean"/>
      </type>
    </element>
  </differential>
</StructureDefinition>

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